C12orf56

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C12orf56 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,868 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible C12orf56-associated GO terms across cancer lineages are Translational initiation, RNA splicing, via transesterification reactions with bulged adenosine as nucleophile, and mRNA splicing, via spliceosome. Each is linked with C12orf56 in more than 7 cancer types. Because this analysis shows association rather than direction, both C12orf56-to-partner and partner-to-C12orf56 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf56→partner) and Y-score (partner→C12orf56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADTranslational initiation →+0.049+1.218<.001<.00138
LUNG_NSCLC_LUSCRNA splicing, via transesterification reactions with bulged adenosine as nucleophile →+0.074+1.467<.001.00637
LUNG_NSCLC_LUSCmRNA splicing, via spliceosome →+0.074+1.467<.001.00637
LUNG_NSCLC_LUSCPositive regulation of stem cell population maintenance →+0.070+1.427<.001.00237
STOMACHHeterochromatin formation →+0.074+1.427.001.00937
LUNG_NSCLC_LUSCProtein-RNA complex organization →+0.069+1.938<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,868 associations by consensus.

Exploration