C12orf29

Across TCGA patient cohorts, C12orf29 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,824 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible C12orf29-associated proteins across cancer lineages are SCAF11, SDF4_T186, and SNRPD2. Each is linked with C12orf29 in more than 4 cancer types. Because this analysis shows association rather than direction, both C12orf29-to-partner and partner-to-C12orf29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C12orf29 versus SCAF11 in OV, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf29→partner) and Y-score (partner→C12orf29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	SCAF11 →	+0.401	+0.547	<.001	<.001	3	5
GBM	SDF4_T186 →	-0.893	-0.334	<.001	<.001	3	5
LSCC	SNRPD2 →	+0.271	+0.480	<.001	<.001	3	5
GBM	CD163 →	-0.825	-0.266	<.001	<.001	3	5
OV	EIF4B →	+0.361	+0.513	<.001	.001	3	5
LSCC	CLASP1 →	+0.196	+0.388	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,824 associations by consensus.

C12orf29 vs SCAF11 — OV

Explore this scatter interactively →