BSX

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BSX protein abundance is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BSX-associated genes across cancer lineages are CCDC180, RNU6-629P, and RN7SKP241. Each is linked with BSX in more than 1 cancer types. Because this analysis shows association rather than direction, both BSX-to-partner and partner-to-BSX results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BSX→partner) and Y-score (partner→BSX) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC180 →+1.153+1.160.008.00331
UCECRNU6-629P →+2.433+3.131.005.00231
UCECRN7SKP241 →+1.036+3.199<.001.00331
UCECOPCML-IT2 →+0.883+3.169<.001.00431
UCECCKLF-CMTM1 →+0.400+3.067.007.00221
UCECVWA5A →+2.270+1.080.001.00811
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

Exploration