BSN

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BSN RNA expression is significantly associated with the protein abundance of many other proteins, with 19,037 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BSN-associated proteins across cancer lineages are ERO1A, MYEF2, and HNRNPR. Each is linked with BSN in more than 4 cancer types. Because this analysis shows association rather than direction, both BSN-to-partner and partner-to-BSN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BSN versus ERO1A in GBM, with a Pearson correlation of -0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BSN→partner) and Y-score (partner→BSN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMERO1A →-0.551-0.956<.001<.00135
LSCCMYEF2 →+0.972+0.421<.001<.00135
LSCCHNRNPR →+0.273+0.441<.001<.00135
LSCCSRSF12_S146 →+1.435+0.495.004<.00135
BRCACASP10 →-0.503-0.532<.001<.00134
PDACCCDC12 →+0.315+0.281.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,037 associations by consensus.

BSN vs ERO1A — GBM

Per-sample scatter of BSN vs ERO1A in GBM (Pearson r = -0.45).

Explore this scatter interactively →

Exploration