BRD9

Across TCGA patient cohorts, BRD9 protein abundance is significantly associated with the RNA expression of many other genes, with 12,069 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BRD9-associated genes across cancer lineages are YPEL1, ICE1, and GJB2. Each is linked with BRD9 in more than 4 cancer types. Because this analysis shows association rather than direction, both BRD9-to-partner and partner-to-BRD9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BRD9 versus YPEL1 in HNSC, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BRD9→partner) and Y-score (partner→BRD9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	YPEL1 →	+0.639	+0.207	.001	.003	3	5
LUAD	ICE1 →	+0.396	+0.190	<.001	<.001	3	5
OV	GJB2 →	-1.986	-0.307	.001	.001	3	5
LUAD	PGBD1 →	+0.609	+0.161	<.001	.006	3	5
LSCC	PSMG4 →	+0.414	+0.218	.003	.001	3	5
COAD	POGZ →	+0.527	+0.224	.008	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,069 associations by consensus.

BRD9 vs YPEL1 — HNSC

Explore this scatter interactively →