BRD7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BRD7 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,720 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible BRD7-associated proteins across cancer lineages are DHX38, CIAPIN1, and CSNK2A2. Each is linked with BRD7 in more than 7 cancer types. Because this analysis shows association rather than direction, both BRD7-to-partner and partner-to-BRD7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BRD7 versus DHX38 in GBM, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BRD7→partner) and Y-score (partner→BRD7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMDHX38 →+0.255+0.585<.001<.00138
LSCCCIAPIN1 →+0.316+0.536<.001<.00137
HNSCCSNK2A2 →+0.269+0.509<.001<.00137
GBMPSME3IP1 →+0.370+0.411<.001<.00136
GBMCFDP1 →+0.374+0.371<.001<.00136
LSCCZC3H14 →+0.280+0.630<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,720 associations by consensus.

BRD7 vs DHX38 — GBM

Per-sample scatter of BRD7 vs DHX38 in GBM (Pearson r = 0.49).

Explore this scatter interactively →

Exploration