BPGM

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BPGM RNA expression is significantly associated with the protein abundance of many other proteins, with 9,297 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible BPGM-associated proteins across cancer lineages are UBE2H, WASL, and CROT. Each is linked with BPGM in more than 4 cancer types. Because this analysis shows association rather than direction, both BPGM-to-partner and partner-to-BPGM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BPGM versus UBE2H in BRCA, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BPGM→partner) and Y-score (partner→BPGM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAUBE2H →+0.428+0.527<.001<.00135
LUADWASL →+0.239+0.711<.001<.00135
OVCROT →+0.445+0.671.001<.00134
LSCCPGAM1_S31 →+0.503+0.484.001.00234
PDACUBE3C →+0.254+0.659<.001<.00134
BRCATES →+0.329+0.414.005.00534
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,297 associations by consensus.

BPGM vs UBE2H — BRCA

Per-sample scatter of BPGM vs UBE2H in BRCA (Pearson r = 0.31).

Explore this scatter interactively →

Exploration