BNC2

Across TCGA cell cohorts, BNC2 RNA expression is significantly associated with the RNA expression of many other genes, with 9,900 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible BNC2-associated genes across cancer lineages are GPR176, KIRREL1, and ARHGAP31. Each is linked with BNC2 in more than 10 cancer types. Because this analysis shows association rather than direction, both BNC2-to-partner and partner-to-BNC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BNC2 versus GPR176 in URINARY_TRACT, with a Pearson correlation of 0.67.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BNC2→partner) and Y-score (partner→BNC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	GPR176 →	+3.363	+2.458	<.001	<.001	3	11
URINARY_TRACT	KIRREL1 →	+3.445	+2.161	<.001	<.001	3	10
LIVER	ARHGAP31 →	+2.460	+2.813	<.001	<.001	3	10
LIVER	DOCK10 →	+3.209	+2.277	<.001	<.001	3	10
LUNG_NSCLC_LUSC	CALU →	+1.666	+1.984	<.001	<.001	3	9
LUNG_NSCLC_LUSC	FSTL1 →	+5.423	+2.081	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,900 associations by consensus.

BNC2 vs GPR176 — URINARY_TRACT

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