BMERB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BMERB1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,411 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BMERB1-associated genes across cancer lineages are NDNF, OSBPL3, and GALNT16. Each is linked with BMERB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both BMERB1-to-partner and partner-to-BMERB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BMERB1 versus NDNF in PDAC, with a Pearson correlation of -0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BMERB1→partner) and Y-score (partner→BMERB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACNDNF →-1.367-1.078<.001<.00132
GBMOSBPL3 →-0.680-0.544<.001.00132
BRCAGALNT16 →+1.106+0.556.002.00432
BRCAPRPH2 →+0.824+0.704.001.00132
BRCATCEAL4 →+0.733+0.487<.001.00132
BRCALARGE1 →+0.935+0.765<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,411 associations by consensus.

BMERB1 vs NDNF — PDAC

Per-sample scatter of BMERB1 vs NDNF in PDAC (Pearson r = -0.47).

Explore this scatter interactively →

Exploration