BIRC3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BIRC3 mutation is significantly associated with the RNA expression of many other genes, with 574 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BIRC3-associated genes across cancer lineages are TRIM53CP, TIMM9P1, and MTND5P35. Each is linked with BIRC3 in more than 2 cancer types. Because this analysis shows association rather than direction, both BIRC3-to-partner and partner-to-BIRC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRIM53CP grouped by BIRC3-low versus BIRC3-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BIRC3→partner) and Y-score (partner→BIRC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTRIM53CP →+0.057+4.962<.001.00333
SKCMTIMM9P1 →+0.104+2.657<.001.00632
BLCAMTND5P35 →+0.031+5.788<.001.00332
SKCMSKA2 →+0.611+3.487.008.00232
SKCMCDCA2 →+0.954+3.706<.001<.00132
SKCMRPL17-C18orf32 →+0.120+3.104<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 574 associations by consensus.

TRIM53CP by BIRC3 expression — COAD

Box plot of TRIM53CP in BIRC3-low vs BIRC3-high samples in COAD.

Explore this box plot interactively →

Exploration