BEND3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BEND3 protein abundance is significantly associated with the RNA expression of many other genes, with 15,435 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible BEND3-associated genes across cancer lineages are MCM7, CPED1, and TLR3. Each is linked with BEND3 in more than 6 cancer types. Because this analysis shows association rather than direction, both BEND3-to-partner and partner-to-BEND3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BEND3 versus MCM7 in HNSC, with a Pearson correlation of 0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BEND3→partner) and Y-score (partner→BEND3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMCM7 →+1.236+0.297<.001<.00137
UCECCPED1 →-1.296-0.415<.001<.00136
UCECTLR3 →-0.727-0.315.004.00136
UCECTUBB →+0.671+0.335<.001<.00136
UCECFOXP4-AS1 →+0.816+0.390<.001<.00136
OVMEX3A →+1.315+0.385<.001.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,435 associations by consensus.

BEND3 vs MCM7 — HNSC

Per-sample scatter of BEND3 vs MCM7 in HNSC (Pearson r = 0.36).

Explore this scatter interactively →

Exploration