BDKRB1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BDKRB1 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible BDKRB1-associated genes across cancer lineages are PRAMEF10, PRAMEF17, and ACSM4. Each is linked with BDKRB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both BDKRB1-to-partner and partner-to-BDKRB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAMEF10 grouped by BDKRB1-low versus BDKRB1-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BDKRB1→partner) and Y-score (partner→BDKRB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCPRAMEF10 →+0.885+4.643<.001.00431
LUNG_SCLCPRAMEF17 →+0.010+4.643<.001.00431
LUNG_SCLCACSM4 →+0.043+4.044.003.00931
LUNG_SCLCPRAMEF33 →+0.490+5.614<.001<.00131
OVARYPCDH11Y →+0.095+4.029<.001.00931
LARGE_INTESTINETBC1D3 →+0.080+4.273<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

PRAMEF10 by BDKRB1 expression — LUNG_SCLC

Box plot of PRAMEF10 in BDKRB1-low vs BDKRB1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration