BCKDHB

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BCKDHB RNA expression is significantly associated with the protein abundance of many other proteins, with 15,235 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible BCKDHB-associated proteins across cancer lineages are PLEKHO2, STAB1, and MYO6. Each is linked with BCKDHB in more than 4 cancer types. Because this analysis shows association rather than direction, both BCKDHB-to-partner and partner-to-BCKDHB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BCKDHB versus PLEKHO2 in GBM, with a Pearson correlation of -0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BCKDHB→partner) and Y-score (partner→BCKDHB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPLEKHO2 →-0.358-0.518<.001<.00135
GBMSTAB1 →-0.477-0.422<.001<.00135
LSCCMYO6 →+0.534+0.565<.001<.00135
OVIRF4 →-0.641-0.893<.001<.00135
COADPPA1 →-0.386-0.286.009.00234
HNSCPRPF6 →+0.238+0.776<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,235 associations by consensus.

BCKDHB vs PLEKHO2 — GBM

Per-sample scatter of BCKDHB vs PLEKHO2 in GBM (Pearson r = -0.39).

Explore this scatter interactively →

Exploration