BARHL2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BARHL2 mutation is significantly associated with the RNA expression of many other genes, with 2,637 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BARHL2-associated genes across cancer lineages are FAM153DP, TRGV11, and CST8. Each is linked with BARHL2 in more than 2 cancer types. Because this analysis shows association rather than direction, both BARHL2-to-partner and partner-to-BARHL2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM153DP grouped by BARHL2-low versus BARHL2-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BARHL2→partner) and Y-score (partner→BARHL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAFAM153DP →+0.041+5.033.003.00333
CESCTRGV11 →+0.094+3.996<.001.00532
BLCACST8 →+0.516+3.959<.001.00632
BLCAOR2D3 →+0.069+3.840<.001.00632
BRCARNU6-751P →+0.127+7.057<.001.00932
UCECMIR548AL →+0.134+2.702<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,637 associations by consensus.

FAM153DP by BARHL2 expression — BLCA

Box plot of FAM153DP in BARHL2-low vs BARHL2-high samples in BLCA.

Explore this box plot interactively →

Exploration