BAMBI

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BAMBI RNA expression is significantly associated with the RNA expression of many other genes, with 15,981 significant associations in total. KIRP shows the largest number of these associations.

The most reproducible BAMBI-associated genes across cancer lineages are SMAD6, WFS1, and BMP4. Each is linked with BAMBI in more than 22 cancer types. Because this analysis shows association rather than direction, both BAMBI-to-partner and partner-to-BAMBI results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BAMBI versus SMAD6 in CHOL, with a Pearson correlation of 0.41.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BAMBI→partner) and Y-score (partner→BAMBI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CHOLSMAD6 →+1.378+1.956.006.003123
ESCAWFS1 →+0.964+1.602<.001<.001320
ACCBMP4 →+1.595+1.662<.001<.001320
ACCSH3BP4 →+1.267+2.050<.001<.001320
CHOLDACT2 →+2.051+1.568.001.001221
KIRPZDHHC8P1 →+1.866+1.261<.001<.001319
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,981 associations by consensus.

BAMBI vs SMAD6 — CHOL

Per-sample scatter of BAMBI vs SMAD6 in CHOL (Pearson r = 0.41).

Explore this scatter interactively →

Exploration