BAMBI

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BAMBI protein abundance is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible BAMBI-associated genes across cancer lineages are TEX13C, GRK5-IT1, and RPL10P5. Each is linked with BAMBI in more than 1 cancer types. Because this analysis shows association rather than direction, both BAMBI-to-partner and partner-to-BAMBI results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BAMBI versus TEX13C in GBM, with a Pearson correlation of -0.63.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BAMBI→partner) and Y-score (partner→BAMBI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTEX13C →-0.153-1.257.002.00931
BRCAGRK5-IT1 →+0.403+0.342<.001.00721
BRCARPL10P5 →+0.240+0.402<.001.00721
BRCAELOCP31 →+0.585+0.402<.001.00721
GBMLINC00526 →-0.638-0.291.009.00811
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

BAMBI vs TEX13C — GBM

Per-sample scatter of BAMBI vs TEX13C in GBM (Pearson r = -0.63).

Explore this scatter interactively →

Exploration