BAMBI

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BAMBI RNA expression is significantly associated with the go_rna of many other GO terms, with 3,729 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible BAMBI-associated GO terms across cancer lineages are Cytosolic transport, Extrinsic apoptotic signaling pathway in absence of ligand, and Golgi vesicle transport. Each is linked with BAMBI in more than 8 cancer types. Because this analysis shows association rather than direction, both BAMBI-to-partner and partner-to-BAMBI results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytosolic transport grouped by BAMBI-low versus BAMBI-high in BLOOD_Lymphoma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (BAMBI→partner) and Y-score (partner→BAMBI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaCytosolic transport →+0.047+0.799<.001.00739
SKINExtrinsic apoptotic signaling pathway in absence of ligand →+0.111+2.047<.001.00138
LUNG_SCLCGolgi vesicle transport →+0.065+2.342<.001<.00138
OVARYProtein localization to lysosome →+0.081+2.386.002<.00138
URINARY_TRACTCell surface receptor protein serine/threonine kinase signaling pathway →+0.055+1.873.002.00229
SKINSignal transduction in absence of ligand →+0.114+2.078<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,729 associations by consensus.

Cytosolic transport by BAMBI expression — BLOOD_Lymphoma

Box plot of Cytosolic transport in BAMBI-low vs BAMBI-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration