B4GALT3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, B4GALT3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,649 significant associations in total. BONE shows the largest number of these associations.

The most reproducible B4GALT3-associated GO terms across cancer lineages are Nuclear pore complex assembly, Mitotic DNA integrity checkpoint signaling, and RNA 3'-end processing. Each is linked with B4GALT3 in more than 9 cancer types. Because this analysis shows association rather than direction, both B4GALT3-to-partner and partner-to-B4GALT3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear pore complex assembly grouped by B4GALT3-low versus B4GALT3-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (B4GALT3→partner) and Y-score (partner→B4GALT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINENuclear pore complex assembly →+0.099+0.620<.001<.001310
UPPER_AERODIGESTIVE_TRACTMitotic DNA integrity checkpoint signaling →+0.100+0.769<.001.00139
BONERNA 3'-end processing →+0.069+0.641<.001.00439
BONEDNA topological change →+0.134+1.059<.001<.00139
BONERegulation of DNA repair →+0.066+0.785.003.00239
BONETranscription initiation at RNA polymerase III promoter →+0.089+0.608.001.00739
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,649 associations by consensus.

Nuclear pore complex assembly by B4GALT3 expression — LARGE_INTESTINE

Box plot of Nuclear pore complex assembly in B4GALT3-low vs B4GALT3-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration