B3GNT9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B3GNT9 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,376 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible B3GNT9-associated proteins across cancer lineages are GSN, CNPY4, and FKBP7. Each is linked with B3GNT9 in more than 7 cancer types. Because this analysis shows association rather than direction, both B3GNT9-to-partner and partner-to-B3GNT9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNT9 versus GSN in PDAC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT9→partner) and Y-score (partner→B3GNT9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACGSN →+0.508+0.328<.001<.00138
UCECCNPY4 →+0.369+0.519<.001.00237
OVFKBP7 →+0.539+1.057<.001<.00137
OVSPARC →+0.576+0.622<.001<.00136
HNSCCOL5A1 →+0.745+0.614<.001<.00136
LUADDDX21_S89 →-1.033-0.563<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,376 associations by consensus.

B3GNT9 vs GSN — PDAC

Per-sample scatter of B3GNT9 vs GSN in PDAC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration