B3GNT9

Across TCGA cell cohorts, B3GNT9 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible B3GNT9-associated genes across cancer lineages are TKTL2, OR2V2, and BPY2. Each is linked with B3GNT9 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT9-to-partner and partner-to-B3GNT9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TKTL2 grouped by B3GNT9-low versus B3GNT9-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT9→partner) and Y-score (partner→B3GNT9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	TKTL2 →	+0.056	+4.509	<.001	<.001	3	1
LARGE_INTESTINE	OR2V2 →	+0.012	+3.510	.001	.003	3	1
LARGE_INTESTINE	BPY2 →	+0.015	+4.022	<.001	.006	3	1
LARGE_INTESTINE	BPY2B →	+0.015	+4.022	<.001	.006	3	1
LARGE_INTESTINE	BPY2C →	+0.015	+4.022	<.001	.006	3	1
LARGE_INTESTINE	ADH1B →	+0.048	+3.726	.004	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

TKTL2 by B3GNT9 expression — LARGE_INTESTINE

Explore this box plot interactively →