B3GNT3

Across TCGA patient cohorts, B3GNT3 protein abundance is significantly associated with the RNA expression of many other genes, with 4,636 significant associations in total. COAD shows the largest number of these associations.

The most reproducible B3GNT3-associated genes across cancer lineages are SRP54-AS1, IPCEF1, and FYN. Each is linked with B3GNT3 in more than 2 cancer types. Because this analysis shows association rather than direction, both B3GNT3-to-partner and partner-to-B3GNT3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNT3 versus SRP54-AS1 in BRCA, with a Pearson correlation of -0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT3→partner) and Y-score (partner→B3GNT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SRP54-AS1 →	-0.995	-0.663	.002	.004	3	3
LUAD	IPCEF1 →	-1.022	-0.627	.006	<.001	3	3
UCEC	FYN →	-0.901	-0.617	<.001	.008	3	3
COAD	METTL16 →	-0.438	-0.448	<.001	<.001	3	3
HNSC	TCEAL3 →	-0.658	-0.288	.001	.001	3	3
COAD	CXCL12 →	-1.066	-0.422	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,636 associations by consensus.

B3GNT3 vs SRP54-AS1 — BRCA

Explore this scatter interactively →