B3GNT2

Across TCGA patient cohorts, B3GNT2 mutation is significantly associated with the RNA expression of many other genes, with 3,760 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible B3GNT2-associated genes across cancer lineages are RNU6-163P, MIR4695, and MIR6846. Each is linked with B3GNT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT2-to-partner and partner-to-B3GNT2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-163P grouped by B3GNT2-low versus B3GNT2-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT2→partner) and Y-score (partner→B3GNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	RNU6-163P →	+0.591	+4.568	<.001	.004	3	2
LUSC	MIR4695 →	+0.638	+6.438	<.001	.001	3	2
LUSC	MIR6846 →	+0.742	+6.578	<.001	.001	3	2
SKCM	RNU6-328P →	+0.202	+4.199	<.001	.009	3	2
BLCA	PEX5L-AS2 →	+0.190	+5.623	<.001	<.001	3	2
SKCM	FOXG1-AS1 →	+0.178	+3.380	<.001	.007	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,760 associations by consensus.

RNU6-163P by B3GNT2 expression — BLCA

Explore this box plot interactively →