B3GALT4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, B3GALT4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,214 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible B3GALT4-associated GO terms across cancer lineages are Endosome organization, Nucleolar large rRNA transcription by RNA polymerase I, and Response to indole-3-methanol. Each is linked with B3GALT4 in more than 11 cancer types. Because this analysis shows association rather than direction, both B3GALT4-to-partner and partner-to-B3GALT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosome organization grouped by B3GALT4-low versus B3GALT4-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GALT4→partner) and Y-score (partner→B3GALT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSEndosome organization →+0.072+1.207.001.002311
LUNG_SCLCNucleolar large rRNA transcription by RNA polymerase I →-0.102-0.932.002.003311
STOMACHResponse to indole-3-methanol →+0.221+1.388<.001.002212
PANCREAST cell mediated cytotoxicity →+0.193+1.460<.001<.001311
OESOPHAGUSPositive regulation of rRNA processing →-0.155-1.427.004.004311
STOMACHViral budding →+0.126+1.308<.001.003310
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,214 associations by consensus.

Endosome organization by B3GALT4 expression — OESOPHAGUS

Box plot of Endosome organization in B3GALT4-low vs B3GALT4-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration