B3GALT4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, B3GALT4 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible B3GALT4-associated genes across cancer lineages are IDI2, ASB17, and C12orf40. Each is linked with B3GALT4 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GALT4-to-partner and partner-to-B3GALT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IDI2 grouped by B3GALT4-low versus B3GALT4-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GALT4→partner) and Y-score (partner→B3GALT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYIDI2 →+0.023+4.029<.001.00931
OVARYASB17 →+0.017+4.807<.001.00331
OVARYC12orf40 →+0.011+4.029<.001.00931
LARGE_INTESTINEBPY2 →+0.022+5.022<.001.00231
LARGE_INTESTINEBPY2B →+0.022+5.022<.001.00231
LARGE_INTESTINEBPY2C →+0.022+5.022<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

IDI2 by B3GALT4 expression — OVARY

Box plot of IDI2 in B3GALT4-low vs B3GALT4-high samples in OVARY.

Explore this box plot interactively →

Exploration