ATPSCKMT

Across TCGA patient cohorts, ATPSCKMT protein abundance is significantly associated with the RNA expression of many other genes, with 477 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATPSCKMT-associated genes across cancer lineages are TBC1D3P2, HECA, and DNAH6. Each is linked with ATPSCKMT in more than 1 cancer types. Because this analysis shows association rather than direction, both ATPSCKMT-to-partner and partner-to-ATPSCKMT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATPSCKMT versus TBC1D3P2 in BRCA, with a Pearson correlation of -0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATPSCKMT→partner) and Y-score (partner→ATPSCKMT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	TBC1D3P2 →	-0.082	-1.435	.008	<.001	3	2
LUAD	HECA →	-0.528	-0.768	.001	.009	3	1
LUAD	DNAH6 →	-1.354	-0.758	.004	.002	3	1
LUAD	STXBP3 →	-0.396	-0.823	.001	.006	3	1
LUAD	WDR77 →	-0.502	-0.811	<.001	.002	3	1
LUAD	KLHL29 →	-0.706	-0.756	.002	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 477 associations by consensus.

ATPSCKMT vs TBC1D3P2 — BRCA

Explore this scatter interactively →