ATP9B

Across TCGA patient cohorts, ATP9B protein abundance is significantly associated with the RNA expression of many other genes, with 7,607 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATP9B-associated genes across cancer lineages are PDZRN4, BRD3, and SMC3. Each is linked with ATP9B in more than 3 cancer types. Because this analysis shows association rather than direction, both ATP9B-to-partner and partner-to-ATP9B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATP9B versus PDZRN4 in GBM, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP9B→partner) and Y-score (partner→ATP9B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PDZRN4 →	-1.189	-0.250	<.001	<.001	3	4
LSCC	BRD3 →	-0.499	-0.131	<.001	.003	3	4
UCEC	SMC3 →	-0.538	-0.318	.002	.003	3	4
BRCA	AKT3 →	-0.722	-0.257	<.001	<.001	3	3
GBM	GPR17 →	-1.384	-0.173	<.001	.001	3	3
CCRCC	AKT3-IT1 →	-0.499	-0.176	.008	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,607 associations by consensus.

ATP9B vs PDZRN4 — GBM

Explore this scatter interactively →