ATP6V0B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP6V0B protein abundance is significantly associated with the RNA expression of many other genes, with 7,614 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATP6V0B-associated genes across cancer lineages are STIM2, SLC35D1, and NIPSNAP3B. Each is linked with ATP6V0B in more than 7 cancer types. Because this analysis shows association rather than direction, both ATP6V0B-to-partner and partner-to-ATP6V0B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATP6V0B versus STIM2 in LSCC, with a Pearson correlation of 0.80.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP6V0B→partner) and Y-score (partner→ATP6V0B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSTIM2 →+0.673+0.474<.001<.00138
LSCCSLC35D1 →+0.570+0.381<.001<.00133
LSCCNIPSNAP3B →-0.380-0.286.002.00233
OVARHGAP42 →+0.904+0.405<.001<.00133
GBMSLCO3A1 →-0.938-0.326<.001<.00133
GBMMTURN →-1.164-0.233<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,614 associations by consensus.

ATP6V0B vs STIM2 — LSCC

Per-sample scatter of ATP6V0B vs STIM2 in LSCC (Pearson r = 0.80).

Explore this scatter interactively →

Exploration