ATP2A3

Across TCGA patient cohorts, ATP2A3 protein abundance is significantly associated with the RNA expression of many other genes, with 18,262 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ATP2A3-associated genes across cancer lineages are CYTIP, JCHAIN, and P2RY8. Each is linked with ATP2A3 in more than 5 cancer types. Because this analysis shows association rather than direction, both ATP2A3-to-partner and partner-to-ATP2A3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATP2A3 versus CYTIP in LSCC, with a Pearson correlation of 0.77.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP2A3→partner) and Y-score (partner→ATP2A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CYTIP →	+1.187	+0.794	<.001	<.001	3	6
COAD	JCHAIN →	+1.797	+0.325	<.001	.002	3	6
LSCC	P2RY8 →	+1.087	+0.821	<.001	<.001	3	6
HNSC	TENT5C →	+1.514	+0.648	<.001	<.001	3	6
LSCC	IGLV5-45 →	+1.902	+0.564	<.001	<.001	3	6
HNSC	IGHM →	+2.360	+0.590	<.001	.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,262 associations by consensus.

ATP2A3 vs CYTIP — LSCC

Explore this scatter interactively →