ATP1B2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP1B2 mutation is significantly associated with the RNA expression of many other genes, with 1,479 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATP1B2-associated genes across cancer lineages are RNU6-188P, MIR1183, and RPL39P25. Each is linked with ATP1B2 in more than 1 cancer types. Because this analysis shows association rather than direction, both ATP1B2-to-partner and partner-to-ATP1B2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-188P grouped by ATP1B2-low versus ATP1B2-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP1B2→partner) and Y-score (partner→ATP1B2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNU6-188P →+0.429+4.748<.001.00332
HNSCMIR1183 →+0.526+4.736<.001.00732
HNSCRPL39P25 →+0.482+4.425<.001.00632
HNSCRNU7-125P →+0.631+4.748<.001.00332
PRADRN7SKP60 →+0.202+5.993.002.00232
COADMTCO3P10 →+0.268+3.736<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,479 associations by consensus.

RNU6-188P by ATP1B2 expression — HNSC

Box plot of RNU6-188P in ATP1B2-low vs ATP1B2-high samples in HNSC.

Explore this box plot interactively →

Exploration