ATIC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATIC protein abundance is significantly associated with the RNA expression of many other genes, with 9,601 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible ATIC-associated genes across cancer lineages are STK16, WDR12, and NIF3L1. Each is linked with ATIC in more than 5 cancer types. Because this analysis shows association rather than direction, both ATIC-to-partner and partner-to-ATIC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATIC versus STK16 in OV, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATIC→partner) and Y-score (partner→ATIC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSTK16 →+0.359+0.288<.001<.00136
OVWDR12 →+0.633+0.429<.001<.00135
OVNIF3L1 →+0.624+0.468<.001<.00135
OVRPE →+0.632+0.374<.001.00235
UCECFARSB →+0.479+0.326<.001<.00135
PDACFPR2 →-1.304-0.285<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,601 associations by consensus.

ATIC vs STK16 — OV

Per-sample scatter of ATIC vs STK16 in OV (Pearson r = 0.47).

Explore this scatter interactively →

Exploration