ATG4C

Across TCGA patient cohorts, ATG4C RNA expression is significantly associated with the RNA expression of many other genes, with 20,218 significant associations in total. ACC shows the largest number of these associations.

The most reproducible ATG4C-associated genes across cancer lineages are BMT2, CEP120, and ERCC4. Each is linked with ATG4C in more than 33 cancer types. Because this analysis shows association rather than direction, both ATG4C-to-partner and partner-to-ATG4C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATG4C versus BMT2 in TGCT, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATG4C→partner) and Y-score (partner→ATG4C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	BMT2 →	+1.209	+0.628	<.001	<.001	3	34
UVM	CEP120 →	+1.207	+1.450	<.001	<.001	3	34
DLBC	ERCC4 →	+0.887	+0.699	<.001	<.001	3	34
THYM	CRLF3 →	+1.196	+0.684	<.001	<.001	3	34
UVM	ZMYM1 →	+1.098	+1.392	<.001	<.001	3	34
SKCM	EFCAB7 →	+0.947	+1.006	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,218 associations by consensus.

ATG4C vs BMT2 — TGCT

Explore this scatter interactively →