ATG14

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATG14 mutation is significantly associated with the RNA expression of many other genes, with 4,230 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATG14-associated genes across cancer lineages are IGHD3-22, EIF3JP1, and RPS20P25. Each is linked with ATG14 in more than 1 cancer types. Because this analysis shows association rather than direction, both ATG14-to-partner and partner-to-ATG14 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGHD3-22 grouped by ATG14-low versus ATG14-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATG14→partner) and Y-score (partner→ATG14) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIGHD3-22 →+1.192+1.724.001<.00132
UCECEIF3JP1 →+0.253+2.742<.001<.00132
UCECRPS20P25 →+0.077+2.245.005.00132
UCECRNU7-90P →+0.183+2.338.001.00332
UCECRNA5SP419 →+0.597+1.939<.001<.00132
HNSCSNORD116-30 →+0.521+5.435<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,230 associations by consensus.

IGHD3-22 by ATG14 expression — UCEC

Box plot of IGHD3-22 in ATG14-low vs ATG14-high samples in UCEC.

Explore this box plot interactively →

Exploration