ATF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ATF1 protein abundance is significantly associated with the RNA expression of many other genes, with 408 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible ATF1-associated genes across cancer lineages are ENC1, FYN, and KCNK9. Each is linked with ATF1 in more than 2 cancer types. Because this analysis shows association rather than direction, both ATF1-to-partner and partner-to-ATF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATF1 versus ENC1 in PANCREAS, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATF1→partner) and Y-score (partner→ATF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASENC1 →+1.571+0.954.001.00233
KIDNEYFYN →+3.510+1.381.008.00623
KIDNEYKCNK9 →+0.191+1.381<.001.00623
LUNG_NSCLC_LUADOCRL →+0.774+1.641.009.00132
LUNG_NSCLC_LUADWDR24 →+0.685+1.496.003.00532
LUNG_NSCLC_LUADRUSF1 →+1.395+2.347.009<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 408 associations by consensus.

ATF1 vs ENC1 — PANCREAS

Per-sample scatter of ATF1 vs ENC1 in PANCREAS (Pearson r = 0.61).

Explore this scatter interactively →

Exploration