ARID4A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARID4A mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARID4A-associated genes across cancer lineages are Akt_pS473, eEF2, and 14-3-3_beta. Each is linked with ARID4A in more than 2 cancer types. Because this analysis shows association rather than direction, both ARID4A-to-partner and partner-to-ARID4A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Akt_pS473 grouped by ARID4A-low versus ARID4A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARID4A→partner) and Y-score (partner→ARID4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAkt_pS473 →+0.413+1.247.044.04133
LUSCeEF2 →+0.201+2.816.045.03632
UCEC14-3-3_beta →-0.101-1.899<.001.00432
UCECGAPDH →+0.377+1.765.014.01132
UCECAkt_pT308 →+0.435+1.999.016.00832
UCECPARP_cleaved →-0.181-1.514.041.01432
Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

Akt_pS473 by ARID4A expression — UCEC

Box plot of Akt_pS473 in ARID4A-low vs ARID4A-high samples in UCEC.

Explore this box plot interactively →

Exploration