ARHGEF7-IT1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ARHGEF7-IT1 RNA differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of ARHGEF7-IT1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where ARHGEF7-IT1 RNA is repressed in tumor relative to normal tissue. In most cancer types ARHGEF7-IT1 is over-expressed in tumor, although a few such as KICH and BRCA show the opposite, repressed pattern.

KICH, BRCA, and KIRP are the cancer types where ARHGEF7-IT1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ARHGEF7-IT1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHAllAll−0.123<.0017view →
BRCAAllIII,IV−0.170<.0016view →
KIRPMaleAll−0.081<.0016view →
THCAAllAll−0.043.0014view →
KIRCMaleII,III,IV−0.061.0152view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

ARHGEF7-IT1–KICH

Tumor-vs-normal expression box plot for ARHGEF7-IT1 RNA in KICH.

Open the KICH breakdown →

Exploration