ARHGEF38-IT1

Across TCGA patient cohorts, ARHGEF38-IT1 RNA expression is significantly associated with the RNA expression of many other genes, with 10,460 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible ARHGEF38-IT1-associated genes across cancer lineages are ARHGEF38, TMC5, and ADCY6-DT. Each is linked with ARHGEF38-IT1 in more than 21 cancer types. Because this analysis shows association rather than direction, both ARHGEF38-IT1-to-partner and partner-to-ARHGEF38-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARHGEF38-IT1 versus ARHGEF38 in ESCA, with a Pearson correlation of 0.84.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGEF38-IT1→partner) and Y-score (partner→ARHGEF38-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	ARHGEF38 →	+2.211	+1.118	<.001	<.001	3	22
ESCA	TMC5 →	+4.549	+1.040	<.001	<.001	3	17
CESC	ADCY6-DT →	+1.269	+0.398	<.001	<.001	3	16
ESCA	TCIM →	+1.817	+0.693	<.001	<.001	3	16
ESCA	KRTAP5-1 →	+1.282	+0.979	<.001	<.001	3	16
ESCA	AGR2 →	+4.589	+0.948	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,460 associations by consensus.

ARHGEF38-IT1 vs ARHGEF38 — ESCA

Explore this scatter interactively →