ARHGAP42P4

Across TCGA patient cohorts, ARHGAP42P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,893 significant associations in total. STAD shows the largest number of these associations.

The most reproducible ARHGAP42P4-associated GO terms across cancer lineages are Pyrimidine nucleotide biosynthetic process, tRNA modification, and Non-canonical NF-kappaB signal transduction. Each is linked with ARHGAP42P4 in more than 6 cancer types. Because this analysis shows association rather than direction, both ARHGAP42P4-to-partner and partner-to-ARHGAP42P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pyrimidine nucleotide biosynthetic process grouped by ARHGAP42P4-low versus ARHGAP42P4-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP42P4→partner) and Y-score (partner→ARHGAP42P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Pyrimidine nucleotide biosynthetic process →	+0.049	+0.028	<.001	<.001	3	7
STAD	tRNA modification →	+0.051	+0.026	<.001	<.001	3	7
ESCA	Non-canonical NF-kappaB signal transduction →	+0.082	+0.031	<.001	.003	3	7
ESCA	Positive regulation of binding →	+0.075	+0.024	<.001	.001	3	6
ESCA	DNA modification →	+0.070	+0.026	<.001	.008	3	6
ESCA	tRNA processing →	+0.078	+0.031	<.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,893 associations by consensus.

Pyrimidine nucleotide biosynthetic process by ARHGAP42P4 expression — STAD

Explore this box plot interactively →