ARHGAP29

Across TCGA patient cohorts, ARHGAP29 protein abundance is significantly associated with the RNA expression of many other genes, with 21,665 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ARHGAP29-associated genes across cancer lineages are ABCA4, ARHGAP29-AS1, and EFS. Each is linked with ARHGAP29 in more than 4 cancer types. Because this analysis shows association rather than direction, both ARHGAP29-to-partner and partner-to-ARHGAP29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARHGAP29 versus ABCA4 in LUAD, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP29→partner) and Y-score (partner→ARHGAP29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	ABCA4 →	+1.650	+0.346	<.001	<.001	3	5
BRCA	ARHGAP29-AS1 →	+0.577	+0.429	<.001	<.001	3	5
LSCC	EFS →	-0.788	-0.263	<.001	<.001	3	4
UCEC	VWA8 →	-0.550	-0.596	<.001	<.001	3	4
GBM	TRIM2 →	-1.014	-0.521	<.001	<.001	3	4
UCEC	FMO6P →	-1.383	-0.683	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,665 associations by consensus.

ARHGAP29 vs ABCA4 — LUAD

Explore this scatter interactively →