ARHGAP19-SLIT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGAP19-SLIT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,804 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ARHGAP19-SLIT1-associated proteins across cancer lineages are CLIP2_S42, KIF5C, and PDLIM1. Each is linked with ARHGAP19-SLIT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both ARHGAP19-SLIT1-to-partner and partner-to-ARHGAP19-SLIT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARHGAP19-SLIT1 versus CLIP2_S42 in GBM, with a Pearson correlation of 0.51.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP19-SLIT1→partner) and Y-score (partner→ARHGAP19-SLIT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCLIP2_S42 →+0.777+0.621<.001<.00133
LSCCKIF5C →+0.762+0.162<.001.00133
GBMPDLIM1 →-0.596-0.679<.001<.00133
CCRCCTMX1_S270 →-0.450-0.040.004.00433
UCECMDC1_S376 →+0.536+0.116<.001.00133
GBMMEN1 →+0.471+0.943<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,804 associations by consensus.

ARHGAP19-SLIT1 vs CLIP2_S42 — GBM

Per-sample scatter of ARHGAP19-SLIT1 vs CLIP2_S42 in GBM (Pearson r = 0.51).

Explore this scatter interactively →

Exploration