APOF

Across TCGA patient cohorts, APOF RNA expression is significantly associated with the protein abundance of many other proteins, with 7,604 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible APOF-associated proteins across cancer lineages are RERE_S656, BCLAF1_S648, and PHF3_S283. Each is linked with APOF in more than 2 cancer types. Because this analysis shows association rather than direction, both APOF-to-partner and partner-to-APOF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, APOF versus RERE_S656 in HNSC, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (APOF→partner) and Y-score (partner→APOF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RERE_S656 →	+0.412	+0.361	<.001	.009	3	3
PDAC	BCLAF1_S648 →	+0.603	+0.116	<.001	<.001	3	3
HNSC	PHF3_S283 →	+0.476	+0.442	<.001	.004	3	3
BRCA	MICALL1_S391 →	-0.972	-0.968	<.001	<.001	3	2
COAD	MSX2_S91 →	-0.664	-0.077	.003	.009	3	2
HNSC	ACIN1_S838 →	+0.337	+0.177	<.001	.002	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,604 associations by consensus.

APOF vs RERE_S656 — HNSC

Explore this scatter interactively →