AP3B1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AP3B1 mutation is significantly associated with the RNA expression of many other genes, with 3,153 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AP3B1-associated genes across cancer lineages are OR13C3, PYY3, and RNU6-1313P. Each is linked with AP3B1 in more than 2 cancer types. Because this analysis shows association rather than direction, both AP3B1-to-partner and partner-to-AP3B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR13C3 grouped by AP3B1-low versus AP3B1-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AP3B1→partner) and Y-score (partner→AP3B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCOR13C3 →+0.020+4.569<.001.00533
LUSCPYY3 →+0.133+4.099<.001.00833
HNSCRNU6-1313P →+0.257+4.526<.001.00733
LUADTSPY8 →+0.053+5.739<.001.00133
UCECRNA5SP413 →+0.897+1.585<.001.00333
UCECABHD3 →+0.618+3.343<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,153 associations by consensus.

OR13C3 by AP3B1 expression — CESC

Box plot of OR13C3 in AP3B1-low vs AP3B1-high samples in CESC.

Explore this box plot interactively →

Exploration