AMTN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AMTN RNA expression is significantly associated with the go_rna of many other GO terms, with 7,006 significant associations in total. THCA shows the largest number of these associations.

The most reproducible AMTN-associated GO terms across cancer lineages are Regeneration, Regulation of establishment of planar polarity, and Negative regulation of epithelial cell proliferation. Each is linked with AMTN in more than 15 cancer types. Because this analysis shows association rather than direction, both AMTN-to-partner and partner-to-AMTN results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AMTN→partner) and Y-score (partner→AMTN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCARegeneration →+0.035+1.651<.001<.001216
TGCTRegulation of establishment of planar polarity →+0.094+0.437<.001<.001314
TGCTNegative regulation of epithelial cell proliferation →+0.032+0.269<.001<.001314
TGCTCartilage development →+0.062+0.272<.001<.001314
TGCTStem cell proliferation →+0.040+0.374<.001<.001314
TGCTRegulation of stem cell proliferation →+0.052+0.392<.001<.001314
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,006 associations by consensus.

Exploration