AMTN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AMTN mutation is significantly associated with the RNA expression of many other genes, with 1,290 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AMTN-associated genes across cancer lineages are CDADC1, IMMP1L, and DCK. Each is linked with AMTN in more than 2 cancer types. Because this analysis shows association rather than direction, both AMTN-to-partner and partner-to-AMTN results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AMTN→partner) and Y-score (partner→AMTN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCDADC1 →+0.430+3.491.006.00233
UCECIMMP1L →+0.574+3.491.001.00223
UCECDCK →+0.811+3.470.006.00332
UCECMAD2L1 →+1.058+3.191.001.00932
UCECABCE1 →+0.811+3.354.002.00532
UCECNUDT2 →+0.866+3.459<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,290 associations by consensus.

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