AMTN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AMTN mutation is significantly associated with the total protein of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AMTN-associated genes across cancer lineages are Caspase-8, JNK_pT183_Y185, and Rab11. Each is linked with AMTN in more than 1 cancer types. Because this analysis shows association rather than direction, both AMTN-to-partner and partner-to-AMTN results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AMTN→partner) and Y-score (partner→AMTN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCaspase-8 →-0.239-3.000.003.03632
UCECJNK_pT183_Y185 →-0.207-3.156.025.02031
UCECRab11 →-0.177-3.169.026.02031
UCECSTAT3_pY705 →-0.575-3.169<.001.02031
UCECTuberin →+0.409+3.169.005.02031
SKCMACVRL1 →+0.165+3.000.038.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

Exploration