ALX3

Across TCGA cell cohorts, ALX3 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ALX3-associated genes across cancer lineages are ACSM6 and AMELY. Each is linked with ALX3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ALX3-to-partner and partner-to-ALX3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACSM6 grouped by ALX3-low versus ALX3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ALX3→partner) and Y-score (partner→ALX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	ACSM6 →	+0.020	+4.169	.004	.007	3	1
LARGE_INTESTINE	AMELY →	+0.036	+4.437	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

ACSM6 by ALX3 expression — LARGE_INTESTINE

Explore this box plot interactively →