ALPI

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ALPI mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ALPI-associated genes across cancer lineages are eIF4E, Notch1, and Annexin-1. Each is linked with ALPI in more than 1 cancer types. Because this analysis shows association rather than direction, both ALPI-to-partner and partner-to-ALPI results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by ALPI-low versus ALPI-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ALPI→partner) and Y-score (partner→ALPI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.279+3.472.001.00232
UCECNotch1 →+0.142+2.469.014.01032
UCECAnnexin-1 →+0.670+3.479.002.00232
UCECShc_pY317 →-0.156-2.321.012.00632
UCECASNS →+0.447+1.807.002.02732
UCECATM →-0.509-2.986.006.03532
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

eIF4E by ALPI expression — UCEC

Box plot of eIF4E in ALPI-low vs ALPI-high samples in UCEC.

Explore this box plot interactively →

Exploration