AKNA

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AKNA mutation is significantly associated with the RNA expression of many other genes, with 3,823 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AKNA-associated genes across cancer lineages are LRR1, DLGAP5, and BCCIP. Each is linked with AKNA in more than 4 cancer types. Because this analysis shows association rather than direction, both AKNA-to-partner and partner-to-AKNA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LRR1 grouped by AKNA-low versus AKNA-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AKNA→partner) and Y-score (partner→AKNA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADLRR1 →+0.609+3.205.005.00935
UCECDLGAP5 →+0.621+2.024.004.00535
SKCMBCCIP →+0.499+3.334.001.00534
SKCMNCAPG →+0.867+3.610<.001.00134
UCECDCK →+0.569+1.903.001<.00134
UCECSLBP →+0.503+3.263<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,823 associations by consensus.

LRR1 by AKNA expression — LUAD

Box plot of LRR1 in AKNA-low vs AKNA-high samples in LUAD.

Explore this box plot interactively →

Exploration