AGPAT4-IT1

associated omics data
AGPAT4 intronic transcript 1Genealiases: C6orf59 · NCRNA00241

Q-omics provides the consensus-scored AGPAT4-IT1 profile across patient tissues and cancer cell-line models. AGPAT4-IT1 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in CESC. Among the 18 cancer types available for tumor–normal comparison, AGPAT4-IT1 is differentially expressed in 9, with the highest sampling consensus in LUAD. Additionally, AGPAT4-IT1 RNA expression shows 16,483 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight CESC, LUAD, and UVM as cancer lineages where AGPAT4-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes AGPAT4-IT1 survival associations across molecular data types. AGPAT4-IT1 RNA expression shows survival associations in the most cancer types (23). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
AGPAT4-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23CESC (76)view →
This table ranks reproducible AGPAT4-IT1 RNA expression–survival associations across cancer types. High AGPAT4-IT1 expression shows unfavorable associations in CESC, KIRC, LUAD, THCA, UVM and MESO. The CESC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify CESC as the clearest survival context for AGPAT4-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CESCOSMedianAll0.4600.701<.00176view →
KIRCDFSTertileAll0.5610.726.00358view →
LUADOSQuartileAll0.7820.885.00648view →
THCADFSTertileII,III,IV0.8000.996<.00141view →
UVMOSQuartileIII,IV0.3870.768.00641view →
MESOOSMedianAll0.3240.647.01428view →
Pink = unfavorable, green = favorable. all 23 lineages →

AGPAT4-IT1-CESC (OS)

Kaplan–Meier survival curve for AGPAT4-IT1 RNA expression in CESC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes AGPAT4-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in THCA for RNA.
AGPAT4-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9THCA (9)view →
This table ranks reproducible tumor–normal expression differences for AGPAT4-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. AGPAT4-IT1 shows lower tumor expression in LUAD, THCA, KICH, BRCA and LUSC and higher tumor expression in HNSC. The LUAD box plot shows higher AGPAT4-IT1 RNA expression in normal versus tumor tissue (log2 FC = −0.568, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUADAllIII,IV−0.568<.0019view →
THCAFemaleII,III,IV−0.522<.0019view →
HNSCMaleIV+0.283<.0018view →
KICHFemaleAll−0.473<.0017view →
BRCAAllIII,IV−0.483<.0016view →
LUSCMaleII,III,IV−0.740<.0015view →
Green = repressed in tumor. all 9 lineages →

AGPAT4-IT1-LUAD

Tumor-vs-normal expression box plot for AGPAT4-IT1 in LUAD.

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Cross-omics associations

This table shows molecular features associated with AGPAT4-IT1 in patient tissues and cancer cell lines. In patient samples, AGPAT4-IT1 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA16,483UVM (6243)view →
Function (RNA)7,162STAD (5761)view →