AGPAT1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGPAT1 mutation is significantly associated with the RNA expression of many other genes, with 1,517 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AGPAT1-associated genes across cancer lineages are COPS8P1, MIR6766, and SSXP4. Each is linked with AGPAT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both AGPAT1-to-partner and partner-to-AGPAT1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGPAT1→partner) and Y-score (partner→AGPAT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIHCCOPS8P1 →+0.050+5.355.004.00533
UCECMIR6766 →+0.321+3.037<.001.00233
LUADSSXP4 →+0.060+5.117<.001.00132
LUADRNA5SP231 →+0.225+4.526<.001.00432
UCECTONSL →+0.684+2.606.005.00632
UCECRNA5SP417 →+0.705+2.936<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,517 associations by consensus.

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