AGER

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGER RNA expression is significantly associated with the protein abundance of many other proteins, with 14,438 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AGER-associated proteins across cancer lineages are SIN3A, PHF1, and TNS2. Each is linked with AGER in more than 4 cancer types. Because this analysis shows association rather than direction, both AGER-to-partner and partner-to-AGER results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (AGER→partner) and Y-score (partner→AGER) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSIN3A →+0.195+0.276.003.00135
GBMPHF1 →+0.214+0.385.002.00134
CCRCCTNS2 →+0.342+0.465.003<.00134
CCRCCTNS2_S931 →+0.588+0.336.001.00434
CCRCCPPP1R12B →+0.546+0.283.002.00234
HNSCSMC3 →+0.248+0.620.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,438 associations by consensus.

Exploration